- Author:
- David Nickerson <nickerso@users.sourceforge.net>
- Date:
- 2015-10-01 16:26:31+13:00
- Desc:
- fix up time variable defintion so that model runs in newer versions of OpenCOR.
- Permanent Source URI:
- https://models.fieldml.org/workspace/eskandari_wright_loo_2005/rawfile/da6a796f479f57e9aa57eb3e21de465989753978/experiments/figure-02.xml
<?xml version="1.0"?>
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xmlns:cmeta="http://www.cellml.org/metadata/1.0#">
<rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
xmlns:cmeta="http://www.cellml.org/metadata/1.0#" xmlns:bqs="http://www.cellml.org/bqs/1.0#"
xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/"
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xmlns:cg="http://www.cellml.org/metadata/graphs/1.0#" xmlns:csim="http://cellml.sourceforge.net/CellMLSimulator/#">
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<dcterms:W3CDTF>2010-04-22</dcterms:W3CDTF>
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<dc:publisher>
Auckland Bioengineering Institute, The University of Auckland.
</dc:publisher>
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</cs:boundVariable>
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0.1
</cs:maximumStepSize>
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1
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500
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</cs:simulation>
</rdf:Description>
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<cg:graph>
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<cg:title>Figure 2(b)</cg:title>
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Reproduction of figure 2(b) from Eskandari et al (2005).
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An example validation study using annotated CellML models
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<component component_ref="variables" name="model" />
</import>
<import xmlns:xlink="http://www.w3.org/1999/xlink"
xlink:href="../decomposed-model/eskandari_2005_units_model.xml">
<units name="M" units_ref="M" />
<units name="volt" units_ref="volt" />
<units name="volt_per_second" units_ref="volt_per_second" />
<units name="second" units_ref="second" />
<units name="uA" units_ref="uA" />
<units name="M_per_second" units_ref="M_per_second"/>
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<variable name="time" units="second" public_interface="in" />
<math xmlns="http://www.w3.org/1998/Math/MathML">
<apply><eq/>
<apply><diff/>
<bvar><ci>time</ci></bvar>
<ci>glucose_i</ci>
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</apply>
</math>
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<variable cmeta:id="N_C" name="N_C" units="dimensionless"
public_interface="out" initial_value="3.4e6" />
<variable cmeta:id="Na_i" name="Na_i" units="M"
public_interface="out" initial_value="500e-3" />
<variable cmeta:id="Na_o" name="Na_o" units="M"
public_interface="out" initial_value="10e-3" />
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<variable cmeta:id="V_initial" name="V_initial" units="volt"
public_interface="out" initial_value="0" />
<variable cmeta:id="V_dot" name="V_dot" units="volt_per_second"
public_interface="out" initial_value="0" />
<variable cmeta:id="time" name="time" units="second"
public_interface="out" />
<variable cmeta:id="V" name="V" units="volt"
public_interface="in" />
<variable cmeta:id="I_NaGl_SS" name="I_NaGl_SS"
public_interface="in" units="uA" />
</component>
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<map_variables variable_1="glucose_i" variable_2="glucose_i" />
</connection>
<connection>
<map_components component_1="glucose_i" component_2="variables" />
<map_variables variable_1="time" variable_2="time" />
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<connection>
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<map_variables variable_1="V_dot" variable_2="V_dot" />
<map_variables variable_1="V" variable_2="V" />
<map_variables variable_1="time" variable_2="time" />
<map_variables variable_1="I_NaGl_SS" variable_2="I_NaGl_SS" />
</connection>
</model>
