Location: BG_AE @ 8db4300e596b / README.txt

Author:
Shelley Fong <sfon036@UoA.auckland.ac.nz>
Date:
2022-05-26 11:44:51+12:00
Desc:
Adding readme on stoich of H, and updating n values
Permanent Source URI:
https://models.fieldml.org/workspace/882/rawfile/8db4300e596beb72efdffd9f564aa6875381ab9d/README.txt

AE is dependent on pH_i and pH_e, 
J_kinetic is scaled by (1+10^(ni(pH_i-pKi)))*(1+10^(-ne(pH_e-pKe)))
This scale is rearranged to 
scale = (1+Kmi^ni*[H_i]^-ni)*(1+Kme^-ne*[H_e]^ne)

You can loosely interpret this as 
1 values are neglected
Km values just change the rxn speed
-ni and ne are the stoichiometries of H_i and H_e

So -ni.[H_i] and ne.[H_e] interpreted to affect both forward and reverse rate constants for every reaction in bond graph AE transporter.