- Author:
- WeiweiAi <wai484@aucklanduni.ac.nz>
- Date:
- 2022-04-20 20:26:31+12:00
- Desc:
- Add concentration clamp;
Check interface IO when mapping;
Add init in the csv to allow building a model with init:
- Permanent Source URI:
- https://models.fieldml.org/workspace/6bc/rawfile/4ff19c3f257b33704e3c001e62550111f4ed828a/Components/gating_kinetics.cellml
<?xml version='1.0' encoding='UTF-8'?>
<model name="gating_kinetics" xmlns="http://www.cellml.org/cellml/1.1#" xmlns:cellml="http://www.cellml.org/cellml/1.1#" xmlns:xlink="http://www.w3.org/1999/xlink">
<import xlink:href="units.cellml">
<units name="ms" units_ref="ms"/>
</import>
<import xlink:href="phiT.cellml">
<component component_ref="phiT" name="phiT"/>
</import>
<component name="gating_kinetics">
<variable name="time" public_interface="in" units="ms"/>
<variable name="X_init" public_interface="in" units="dimensionless"/>
<variable name="X_inf" public_interface="in" units="dimensionless"/>
<variable name="tau_X" public_interface="in" units="ms"/>
<variable name="Q_10" private_interface="out" public_interface="in" units="dimensionless"/>
<variable name="T" private_interface="out" public_interface="in" units="kelvin"/>
<variable name="T_0" private_interface="out" public_interface="in" units="kelvin"/>
<variable name="phi_T" private_interface="in" units="dimensionless"/>
<variable initial_value="X_init" name="X" public_interface="out" units="dimensionless"/>
<math xmlns="http://www.w3.org/1998/Math/MathML">
<apply>
<eq/>
<apply>
<diff/>
<bvar>
<ci>time</ci>
</bvar>
<ci>X</ci>
</apply>
<apply>
<times/>
<apply>
<divide/>
<apply>
<minus/>
<ci>X_inf</ci>
<ci>X</ci>
</apply>
<ci>tau_X</ci>
</apply>
<ci>phi_T</ci>
</apply>
</apply>
</math>
</component>
<group>
<relationship_ref relationship="encapsulation"/>
<component_ref component="gating_kinetics">
<component_ref component="phiT"/>
</component_ref>
</group>
<connection>
<map_components component_1="gating_kinetics" component_2="phiT"/>
<map_variables variable_1="T" variable_2="T"/>
<map_variables variable_1="T_0" variable_2="T_0"/>
<map_variables variable_1="Q_10" variable_2="Q_10"/>
<map_variables variable_1="phi_T" variable_2="phi_T"/>
</connection>
</model>
