Location: Hodgkin & Huxley (1952) model @ f60338fb964a / BG / default_values_BG.cellml

Author:
WeiweiAi <wai484@aucklanduni.ac.nz>
Date:
2022-03-17 12:12:51+13:00
Desc:
Move the folders to BG; Add open channel testing
Permanent Source URI:
https://models.fieldml.org/workspace/64f/rawfile/f60338fb964a811a3c12944d752e3b0f5165ce39/BG/default_values_BG.cellml

<?xml version='1.0' encoding='UTF-8'?>
<model name="default_values_BG" xmlns="http://www.cellml.org/cellml/1.1#" xmlns:cellml="http://www.cellml.org/cellml/1.1#" xmlns:xlink="http://www.w3.org/1999/xlink">
    <import xlink:href="../cellLib/BG/units_BG.cellml">
        <units name="per_fmol" units_ref="per_fmol"/>
        <units name="fmol" units_ref="fmol"/>
        <units name="fmol_per_sec" units_ref="fmol_per_sec"/>
        <units name="fF" units_ref="fF"/>
        <units name="fS" units_ref="fS"/>
        <units name="fC" units_ref="fC"/>
    </import>
    <component name="model_para">
        <variable initial_value="279.45" name="T" public_interface="out" units="kelvin"/>
        <variable initial_value="0.3e9" name="C_m" public_interface="out" units="fF"/>
        <variable initial_value="0.09e12" name="g_leak" public_interface="out" units="fS"/>
        <variable initial_value="-54.387e-3" name="V_leak" public_interface="out" units="volt"/>
        <variable initial_value="0.0185182" name="K_i_Na" public_interface="out" units="per_fmol"/>
        <variable initial_value="0.129566" name="K_e_Na" public_interface="out" units="per_fmol"/>
        <variable initial_value="314.678" name="K_S00" public_interface="out" units="per_fmol"/>
        <variable initial_value="1.86618" name="K_S10" public_interface="out" units="per_fmol"/>
        <variable initial_value="0.0332016" name="K_S20" public_interface="out" units="per_fmol"/>
        <variable initial_value="0.0017721" name="K_S30" public_interface="out" units="per_fmol"/>
        <variable initial_value="624203" name="K_S01" public_interface="out" units="per_fmol"/>
        <variable initial_value="3701.79" name="K_S11" public_interface="out" units="per_fmol"/>
        <variable initial_value="65.8596" name="K_S21" public_interface="out" units="per_fmol"/>
        <variable initial_value="3.51518" name="K_S31" public_interface="out" units="per_fmol"/>
        <variable initial_value="0.00239933" name="kappa_Na" public_interface="out" units="fmol_per_sec"/>
        <variable initial_value="45.3331" name="kappa_m10" public_interface="out" units="fmol_per_sec"/>
        <variable initial_value="5096.11" name="kappa_m20" public_interface="out" units="fmol_per_sec"/>
        <variable initial_value="143219" name="kappa_m30" public_interface="out" units="fmol_per_sec"/>
        <variable initial_value="0.0228537" name="kappa_m11" public_interface="out" units="fmol_per_sec"/>
        <variable initial_value="2.56909" name="kappa_m21" public_interface="out" units="fmol_per_sec"/>
        <variable initial_value="72.2007" name="kappa_m31" public_interface="out" units="fmol_per_sec"/>
        <variable initial_value="0.00372982" name="kappa_h0" public_interface="out" units="fmol_per_sec"/>
        <variable initial_value="0.628929" name="kappa_h1" public_interface="out" units="fmol_per_sec"/>
        <variable initial_value="35.3504" name="kappa_h2" public_interface="out" units="fmol_per_sec"/>
        <variable initial_value="662.317" name="kappa_h3" public_interface="out" units="fmol_per_sec"/>
        <variable initial_value="0.971141" name="z_m_f" public_interface="out" units="dimensionless"/>
        <variable initial_value="-1.47758" name="z_m_r" public_interface="out" units="dimensionless"/>
        <variable initial_value="-1.38346" name="z_h_f" public_interface="out" units="dimensionless"/>
        <variable initial_value="1.26236" name="z_h_r" public_interface="out" units="dimensionless"/>
        <variable initial_value="1" name="z_Na" public_interface="out" units="dimensionless"/>
        <variable initial_value="0.0486411" name="K_i_K" public_interface="out" units="per_fmol"/>
        <variable initial_value="0.340327" name="K_e_K" public_interface="out" units="per_fmol"/>
        <variable initial_value="3432.15" name="K_S0" public_interface="out" units="per_fmol"/>
        <variable initial_value="75.6474" name="K_S1" public_interface="out" units="per_fmol"/>
        <variable initial_value="4.44621" name="K_S2" public_interface="out" units="per_fmol"/>
        <variable initial_value="0.587989" name="K_S3" public_interface="out" units="per_fmol"/>
        <variable initial_value="0.207356" name="K_S4" public_interface="out" units="per_fmol"/>
        <variable initial_value="0.0165539" name="kappa_K" public_interface="out" units="fmol_per_sec"/>
        <variable initial_value="0.816122" name="kappa_n1" public_interface="out" units="fmol_per_sec"/>
        <variable initial_value="27.7708" name="kappa_n2" public_interface="out" units="fmol_per_sec"/>
        <variable initial_value="314.993" name="kappa_n3" public_interface="out" units="fmol_per_sec"/>
        <variable initial_value="1190.95" name="kappa_n4" public_interface="out" units="fmol_per_sec"/>
        <variable initial_value="0.879625" name="z_n_f" public_interface="out" units="dimensionless"/>
        <variable initial_value="-0.250268" name="z_n_r" public_interface="out" units="dimensionless"/>
        <variable initial_value="1" name="z_K" public_interface="out" units="dimensionless"/>
    </component>
    <component name="openCH_para">
        <variable initial_value="0.0795738" name="K_i_Na" public_interface="out" units="per_fmol"/>
        <variable initial_value="0.556754" name="K_e_Na" public_interface="out" units="per_fmol"/>
        <variable initial_value="0.044303" name="K_sa_Na" public_interface="out" units="per_fmol"/>
        <variable initial_value="0.044303" name="kappa_Na" public_interface="out" units="fmol_per_sec"/>
        <variable initial_value="166.058" name="q_sa_Na" public_interface="out" units="fmol"/>
        <variable initial_value="0.080643" name="K_i_K" public_interface="out" units="per_fmol"/>
        <variable initial_value="0.564235" name="K_e_K" public_interface="out" units="per_fmol"/>
        <variable initial_value="0.0455016" name="K_sa_K" public_interface="out" units="per_fmol"/>
        <variable initial_value="0.0455016" name="kappa_K" public_interface="out" units="fmol_per_sec"/>
        <variable initial_value="49.8173" name="q_sa_K" public_interface="out" units="fmol"/>
    </component>
    <component name="initials">
        <variable initial_value="-13039" name="q_m_init" public_interface="out" units="fC"/>
        <variable initial_value="257368000" name="q_i_Na_init" public_interface="out" units="fmol"/>
        <variable initial_value="293304000" name="q_e_Na_init" public_interface="out" units="fmol"/>
        <variable initial_value="2.0755e+09" name="q_i_K_init" public_interface="out" units="fmol"/>
        <variable initial_value="12120000" name="q_e_K_init" public_interface="out" units="fmol"/>
        <variable initial_value="81.5268" name="q_S00_init" public_interface="out" units="fmol"/>
        <variable initial_value="51.9717" name="q_S01_init" public_interface="out" units="fmol"/>
        <variable initial_value="18.4572" name="q_S10_init" public_interface="out" units="fmol"/>
        <variable initial_value="11.7661" name="q_S11_init" public_interface="out" units="fmol"/>
        <variable initial_value="1.39288" name="q_S20_init" public_interface="out" units="fmol"/>
        <variable initial_value="0.88793" name="q_S21_init" public_interface="out" units="fmol"/>
        <variable initial_value="0.0350377" name="q_S30_init" public_interface="out" units="fmol"/>
        <variable initial_value="0.0223359" name="q_S31_init" public_interface="out" units="fmol"/>
        <variable initial_value="8.94277" name="q_S0_init" public_interface="out" units="fmol"/>
        <variable initial_value="19.1849" name="q_S1_init" public_interface="out" units="fmol"/>
        <variable initial_value="15.434" name="q_S2_init" public_interface="out" units="fmol"/>
        <variable initial_value="5.51842" name="q_S3_init" public_interface="out" units="fmol"/>
        <variable initial_value="0.739916" name="q_S4_init" public_interface="out" units="fmol"/>
    </component>
</model>