- Author:
- David Nickerson <nickerso@users.sourceforge.net>
- Date:
- 2015-05-25 08:24:59+12:00
- Desc:
- change back to local model
- Permanent Source URI:
- https://models.fieldml.org/w/andre/testing-Sed-ML-nesting/rawfile/b956df286af04c75b67ab47cf881131b0e9056db/v3-example4-repeated-scan-oscli.xml
<?xml version="1.0" encoding="utf-8"?>
<!-- Written by libSedML v1.1.4992.38982 see http://libsedml.sf.net -->
<sedML xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="http://sed-ml.org/ sed-ml-L1-V2.xsd" xmlns="http://sed-ml.org/sed-ml/level1/version2" level="1"
version="2">
<listOfSimulations>
<uniformTimeCourse id="timecourse1" initialTime="0" outputStartTime="0" outputEndTime="20" numberOfPoints="1000">
<algorithm kisaoID="KISAO:0000019" />
</uniformTimeCourse>
</listOfSimulations>
<listOfModels>
<model id="model1" language="urn:sedml:language:sbml" source="http://sourceforge.net/p/libsedml/code/119/tree/trunk/Samples/models/oscli.xml?format=raw" />
</listOfModels>
<listOfTasks>
<task id="task0" modelReference="model1" simulationReference="timecourse1" />
<repeatedTask id="task1" resetModel="true" range="current">
<listOfRanges>
<vectorRange id="current">
<value>8</value>
<value>4</value>
<value>0.4</value>
</vectorRange>
</listOfRanges>
<listOfChanges>
<setValue target="/sbml:sbml/sbml:model/sbml:listOfParameters/sbml:parameter[@id='J0_v0']"
range="current" modelReference="model1">
<math xmlns="http://www.w3.org/1998/Math/MathML">
<ci> current </ci>
</math>
</setValue>
</listOfChanges>
<listOfSubTasks>
<subTask order="1" task="task0" />
</listOfSubTasks>
</repeatedTask>
</listOfTasks>
<listOfDataGenerators>
<dataGenerator id="time1" name="time">
<listOfVariables>
<variable id="time" name="time" taskReference="task1" target="time" />
</listOfVariables>
<math xmlns="http://www.w3.org/1998/Math/MathML">
<ci> time </ci>
</math>
</dataGenerator>
<dataGenerator id="J0_v0_1" name="J0_v0">
<listOfVariables>
<variable id="J0_v0" name="J0_v0" taskReference="task1" target="/sbml:sbml/sbml:model/sbml:listOfParameters/sbml:parameter[@id='J0_v0']" />
</listOfVariables>
<math xmlns="http://www.w3.org/1998/Math/MathML">
<ci> J0_v0 </ci>
</math>
</dataGenerator>
<dataGenerator id="S1_1" name="S1">
<listOfVariables>
<variable id="S1" name="S1" taskReference="task1" target="/sbml:sbml/sbml:model/sbml:listOfSpecies/sbml:species[@id='S1']" />
</listOfVariables>
<math xmlns="http://www.w3.org/1998/Math/MathML">
<ci> S1 </ci>
</math>
</dataGenerator>
<dataGenerator id="S2_1" name="S2">
<listOfVariables>
<variable id="S2" name="S2" taskReference="task1" target="/sbml:sbml/sbml:model/sbml:listOfSpecies/sbml:species[@id='S2']" />
</listOfVariables>
<math xmlns="http://www.w3.org/1998/Math/MathML">
<ci> S2 </ci>
</math>
</dataGenerator>
</listOfDataGenerators>
<listOfOutputs>
<plot2D id="plot1" name="Timecourse (Oscli) (for v0 = 8, 4, 0.4)">
<listOfCurves>
<curve id="curve1" logX="false" logY="false" xDataReference="time1" yDataReference="S1_1" />
<curve id="curve2" logX="false" logY="false" xDataReference="time1" yDataReference="S2_1" />
</listOfCurves>
</plot2D>
</listOfOutputs>
</sedML>