- Author:
- David Nickerson <nickerso@users.sourceforge.net>
- Date:
- 2011-03-21 16:56:17+13:00
- Desc:
- updating the initial documentation to enable better navigation of a more complete exposure of the current state of the workspace.
- Permanent Source URI:
- https://models.fieldml.org/w/andre/cortassa-ECME-2006/rawfile/24ae0a590dc46cc7e4bfb1a017c61678ae6ca6b8/cellml/components/initial_values.xml
<?xml version="1.0" encoding="iso-8859-1"?>
<model
name="cortassa_ECME_model_2006_initial_values"
cmeta:id="initial-values-model"
xmlns="http://www.cellml.org/cellml/1.1#"
xmlns:cellml="http://www.cellml.org/cellml/1.1#"
xmlns:cmeta="http://www.cellml.org/metadata/1.0#"
xmlns:xlink="http://www.w3.org/1999/xlink">
<rdf:RDF
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
xmlns:cmeta="http://www.cellml.org/metadata/1.0#"
xmlns:bqs="http://www.cellml.org/bqs/1.0#"
xmlns:dc="http://purl.org/dc/elements/1.1/"
xmlns:dcterms="http://purl.org/dc/terms/"
xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#"
xmlns:cs="http://www.cellml.org/metadata/simulation/1.0#"
xmlns:csim="http://cellml.sourceforge.net/CellMLSimulator/#">
<rdf:Description rdf:ID="andre">
<vCard:N rdf:parseType="Resource">
<vCard:Family>Nickerson</vCard:Family>
<vCard:Given>David</vCard:Given>
</vCard:N>
<vCard:EMAIL rdf:parseType="Resource">
<rdf:value>david.nickerson@nus.edu.sg</rdf:value>
<rdf:type rdf:resource="http://imc.org/vCard/3.0#internet"/>
</vCard:EMAIL>
<vCard:ORG rdf:parseType="Resource">
<vCard:Orgname>National University of Singapore</vCard:Orgname>
<vCard:Orgunit>Division of Bioengineering</vCard:Orgunit>
</vCard:ORG>
</rdf:Description>
<rdf:Description rdf:about="#ATPi_initial">
<csim:isInitialValueOf rdf:resource="model.xml#ATPi"/>
</rdf:Description>
<rdf:Description rdf:about="#V_initial">
<csim:isInitialValueOf rdf:resource="model.xml#V"/>
</rdf:Description>
<rdf:Description rdf:about="#C1_RyR_initial">
<csim:isInitialValueOf rdf:resource="model.xml#C1_RyR"/>
</rdf:Description>
<rdf:Description rdf:about="#C2_RyR_initial">
<csim:isInitialValueOf rdf:resource="model.xml#C2_RyR"/>
</rdf:Description>
<rdf:Description rdf:about="#O2_RyR_initial">
<csim:isInitialValueOf rdf:resource="model.xml#O2_RyR"/>
</rdf:Description>
<rdf:Description rdf:about="#mNa_initial">
<csim:isInitialValueOf rdf:resource="model.xml#mNa"/>
</rdf:Description>
<rdf:Description rdf:about="#hNa_initial">
<csim:isInitialValueOf rdf:resource="model.xml#hNa"/>
</rdf:Description>
<rdf:Description rdf:about="#jNa_initial">
<csim:isInitialValueOf rdf:resource="model.xml#jNa"/>
</rdf:Description>
<rdf:Description rdf:about="#xKs_initial">
<csim:isInitialValueOf rdf:resource="model.xml#xKs"/>
</rdf:Description>
<rdf:Description rdf:about="#Open_initial">
<csim:isInitialValueOf rdf:resource="model.xml#Open"/>
</rdf:Description>
<rdf:Description rdf:about="#OCa_initial">
<csim:isInitialValueOf rdf:resource="model.xml#OCa"/>
</rdf:Description>
<rdf:Description rdf:about="#yCa_initial">
<csim:isInitialValueOf rdf:resource="model.xml#yCa"/>
</rdf:Description>
<rdf:Description rdf:about="#Ki_initial">
<csim:isInitialValueOf rdf:resource="model.xml#Ki"/>
</rdf:Description>
<rdf:Description rdf:about="#Nai_initial">
<csim:isInitialValueOf rdf:resource="model.xml#Nai"/>
</rdf:Description>
<rdf:Description rdf:about="#Cai_initial">
<csim:isInitialValueOf rdf:resource="model.xml#Cai"/>
</rdf:Description>
<rdf:Description rdf:about="#ADPm_initial">
<csim:isInitialValueOf rdf:resource="model.xml#ADPm"/>
</rdf:Description>
<rdf:Description rdf:about="#Dpsi_initial">
<csim:isInitialValueOf rdf:resource="model.xml#Dpsi"/>
</rdf:Description>
<rdf:Description rdf:about="#NADH_initial">
<csim:isInitialValueOf rdf:resource="model.xml#NADH"/>
</rdf:Description>
<rdf:Description rdf:about="#Oaa_initial">
<csim:isInitialValueOf rdf:resource="model.xml#Oaa"/>
</rdf:Description>
<rdf:Description rdf:about="#AKG_initial">
<csim:isInitialValueOf rdf:resource="model.xml#AKG"/>
</rdf:Description>
<rdf:Description rdf:about="#SCoA_initial">
<csim:isInitialValueOf rdf:resource="model.xml#SCoA"/>
</rdf:Description>
<rdf:Description rdf:about="#Succ_initial">
<csim:isInitialValueOf rdf:resource="model.xml#Succ"/>
</rdf:Description>
<rdf:Description rdf:about="#FUM_initial">
<csim:isInitialValueOf rdf:resource="model.xml#FUM"/>
</rdf:Description>
<rdf:Description rdf:about="#MAL_initial">
<csim:isInitialValueOf rdf:resource="model.xml#MAL"/>
</rdf:Description>
<rdf:Description rdf:about="#ISOC_initial">
<csim:isInitialValueOf rdf:resource="model.xml#ISOC"/>
</rdf:Description>
<rdf:Description rdf:about="#Cam_initial">
<csim:isInitialValueOf rdf:resource="model.xml#Cam"/>
</rdf:Description>
<rdf:Description rdf:about="#CaNSR_initial">
<csim:isInitialValueOf rdf:resource="model.xml#CaNSR"/>
</rdf:Description>
<rdf:Description rdf:about="#CaJSR_initial">
<csim:isInitialValueOf rdf:resource="model.xml#CaJSR"/>
</rdf:Description>
<rdf:Description rdf:about="#CaSS_initial">
<csim:isInitialValueOf rdf:resource="model.xml#CaSS"/>
</rdf:Description>
<rdf:Description rdf:about="#N1_initial">
<csim:isInitialValueOf rdf:resource="model.xml#N1"/>
</rdf:Description>
<rdf:Description rdf:about="#P0_initial">
<csim:isInitialValueOf rdf:resource="model.xml#P0"/>
</rdf:Description>
<rdf:Description rdf:about="#P1_initial">
<csim:isInitialValueOf rdf:resource="model.xml#P1"/>
</rdf:Description>
<rdf:Description rdf:about="#P2_initial">
<csim:isInitialValueOf rdf:resource="model.xml#P2"/>
</rdf:Description>
<rdf:Description rdf:about="#P3_initial">
<csim:isInitialValueOf rdf:resource="model.xml#P3"/>
</rdf:Description>
<rdf:Description rdf:about="#LTRPNCa_initial">
<csim:isInitialValueOf rdf:resource="model.xml#LTRPNCa"/>
</rdf:Description>
<rdf:Description rdf:about="#HTRPNCa_initial">
<csim:isInitialValueOf rdf:resource="model.xml#HTRPNCa"/>
</rdf:Description>
<rdf:Description rdf:about="#C1_initial">
<csim:isInitialValueOf rdf:resource="model.xml#C1"/>
</rdf:Description>
<rdf:Description rdf:about="#CCa0_initial">
<csim:isInitialValueOf rdf:resource="model.xml#CCa0"/>
</rdf:Description>
<rdf:Description rdf:about="#C0_initial">
<csim:isInitialValueOf rdf:resource="model.xml#C0"/>
</rdf:Description>
<rdf:Description rdf:about="#C2_initial">
<csim:isInitialValueOf rdf:resource="model.xml#C2"/>
</rdf:Description>
<rdf:Description rdf:about="#CCa1_initial">
<csim:isInitialValueOf rdf:resource="model.xml#CCa1"/>
</rdf:Description>
<rdf:Description rdf:about="#C3_initial">
<csim:isInitialValueOf rdf:resource="model.xml#C3"/>
</rdf:Description>
<rdf:Description rdf:about="#CCa2_initial">
<csim:isInitialValueOf rdf:resource="model.xml#CCa2"/>
</rdf:Description>
<rdf:Description rdf:about="#C4_initial">
<csim:isInitialValueOf rdf:resource="model.xml#C4"/>
</rdf:Description>
<rdf:Description rdf:about="#CCa3_initial">
<csim:isInitialValueOf rdf:resource="model.xml#CCa3"/>
</rdf:Description>
<rdf:Description rdf:about="#CCa4_initial">
<csim:isInitialValueOf rdf:resource="model.xml#CCa4"/>
</rdf:Description>
<rdf:Description rdf:about="#CrPi_mito_initial">
<csim:isInitialValueOf rdf:resource="model.xml#CrPi_mito"/>
</rdf:Description>
<rdf:Description rdf:about="#CrPi_cyto_initial">
<csim:isInitialValueOf rdf:resource="model.xml#CrPi_cyto"/>
</rdf:Description>
<rdf:Description rdf:about="#ATPi_cyto_initial">
<csim:isInitialValueOf rdf:resource="model.xml#ATPi_cyto"/>
</rdf:Description>
<rdf:Description rdf:about="#ASP_initial">
<csim:isInitialValueOf rdf:resource="model.xml#ASP"/>
</rdf:Description>
<rdf:Description rdf:about="#N0_initial">
<csim:isInitialValueOf rdf:resource="model.xml#N0"/>
</rdf:Description>
</rdf:RDF>
<import xlink:href="units.xml">
<units name="mm" units_ref="mm"/>
<units name="nmol" units_ref="nmol"/>
<units name="mM" units_ref="mM"/>
<units name="K" units_ref="K"/>
<units name="um" units_ref="um"/>
<units name="ms" units_ref="ms"/>
<units name="per_ms" units_ref="per_ms"/>
<units name="mV" units_ref="mV"/>
<units name="per_mV" units_ref="per_mV"/>
<units name="mM_per_ms" units_ref="mM_per_ms"/>
<units name="mM_per_ms4" units_ref="mM_per_ms4"/>
<units name="per_mM_per_ms" units_ref="per_mM_per_ms"/>
<units name="per_mM" units_ref="per_mM"/>
<units name="pH_units" units_ref="pH_units"/>
<units name="per_pH_units" units_ref="per_pH_units"/>
<units name="uA" units_ref="uA"/>
<units name="uL" units_ref="uL"/>
<units name="uL_per_cm3" units_ref="uL_per_cm3"/>
<units name="cm" units_ref="cm"/>
<units name="cm2" units_ref="cm2"/>
<units name="per_mM3_per_ms" units_ref="per_mM3_per_ms"/>
<units name="per_ms_per_mM" units_ref="per_ms_per_mM"/>
<units name="per_mM4_per_ms" units_ref="per_mM4_per_ms"/>
<units name="uA_per_cm2" units_ref="uA_per_cm2"/>
<units name="uA_per_mA" units_ref="uA_per_mA"/>
<units name="mM_per_ms_per_mV" units_ref="mM_per_ms_per_mV"/>
<units name="C_per_mmol" units_ref="C_per_mmol"/>
<units name="C_per_mol" units_ref="C_per_mol"/>
<units name="mM_per_mV" units_ref="mM_per_mV"/>
<units name="mV_per_mM" units_ref="mV_per_mM"/>
<units name="N_per_mm2" units_ref="N_per_mm2"/>
<units name="mS" units_ref="mS"/>
<units name="mS_per_cm2" units_ref="mS_per_cm2"/>
<units name="cm_per_s" units_ref="cm_per_s"/>
<units name="cm_per_ms" units_ref="cm_per_ms"/>
<units name="J_per_mol_per_K" units_ref="J_per_mol_per_K"/>
<units name="uF" units_ref="uF"/>
<units name="uF_per_cm2" units_ref="uF_per_cm2"/>
<units name="s_per_ms" units_ref="s_per_ms"/>
<units name="mM2" units_ref="mM2"/>
<units name="per_ms3" units_ref="per_ms3"/>
<units name="cm2_per_uA" units_ref="cm2_per_uA"/>
<units name="cm2_per_uF" units_ref="cm2_per_uF"/>
<units name="per_um" units_ref="per_um"/>
<units name="C_cm_per_s_per_mol" units_ref="C_cm_per_s_per_mol"/>
<units name="mM3_cm2_per_uA" units_ref="mM3_cm2_per_uA"/>
<units name="mM3" units_ref="mM3"/>
<units name="mmol_per_mol" units_ref="mmol_per_mol"/>
<units name="mmol_per_C_per_cm" units_ref="mmol_per_C_per_cm"/>
<units name="TODO" units_ref="TODO"/>
</import>
<component name="initial_values" cmeta:id="initial_values">
<variable initial_value="7.98691" name="ATPi_initial" cmeta:id="ATPi_initial" private_interface="out" public_interface="out" units="dimensionless"/>
<variable initial_value="-86.4154" name="V_initial" cmeta:id="V_initial" private_interface="out" public_interface="out" units="dimensionless"/>
<variable initial_value="0.748798" name="C1_RyR_initial" cmeta:id="C1_RyR_initial" private_interface="out" public_interface="out" units="dimensionless"/>
<variable initial_value="0.250904" name="C2_RyR_initial" cmeta:id="C2_RyR_initial" private_interface="out" public_interface="out" units="dimensionless"/>
<variable initial_value="3.5175e-10" name="O2_RyR_initial" cmeta:id="O2_RyR_initial" private_interface="out" public_interface="out" units="dimensionless"/>
<variable initial_value="0.0327969" name="mNa_initial" cmeta:id="mNa_initial" private_interface="out" public_interface="out" units="dimensionless"/>
<variable initial_value="0.988991" name="hNa_initial" cmeta:id="hNa_initial" private_interface="out" public_interface="out" units="dimensionless"/>
<variable initial_value="0.992918" name="jNa_initial" cmeta:id="jNa_initial" private_interface="out" public_interface="out" units="dimensionless"/>
<variable initial_value="0.000127552" name="xKs_initial" cmeta:id="xKs_initial" private_interface="out" public_interface="out" units="dimensionless"/>
<variable initial_value="6.96577e-24" name="Open_initial" cmeta:id="Open_initial" private_interface="out" public_interface="out" units="dimensionless"/>
<variable initial_value="0" name="OCa_initial" cmeta:id="OCa_initial" private_interface="out" public_interface="out" units="dimensionless"/>
<variable initial_value="0.941505" name="yCa_initial" cmeta:id="yCa_initial" private_interface="out" public_interface="out" units="dimensionless"/>
<variable initial_value="148.065" name="Ki_initial" cmeta:id="Ki_initial" private_interface="out" public_interface="out" units="dimensionless"/>
<variable initial_value="7.51215" name="Nai_initial" cmeta:id="Nai_initial" private_interface="out" public_interface="out" units="dimensionless"/>
<variable initial_value="6.71512e-05" name="Cai_initial" cmeta:id="Cai_initial" private_interface="out" public_interface="out" units="dimensionless"/>
<variable initial_value="0.0258454" name="ADPm_initial" cmeta:id="ADPm_initial" private_interface="out" public_interface="out" units="dimensionless"/>
<variable initial_value="164.073" name="Dpsi_initial" cmeta:id="Dpsi_initial" private_interface="out" public_interface="out" units="dimensionless"/>
<variable initial_value="7.76311" name="NADH_initial" cmeta:id="NADH_initial" private_interface="out" public_interface="out" units="dimensionless"/>
<variable initial_value="1.08962e-07" name="Oaa_initial" cmeta:id="Oaa_initial" private_interface="out" public_interface="out" units="dimensionless"/>
<variable initial_value="0.000610554" name="AKG_initial" cmeta:id="AKG_initial" private_interface="out" public_interface="out" units="dimensionless"/>
<variable initial_value="0.247364" name="SCoA_initial" cmeta:id="SCoA_initial" private_interface="out" public_interface="out" units="dimensionless"/>
<variable initial_value="0.000394005" name="Succ_initial" cmeta:id="Succ_initial" private_interface="out" public_interface="out" units="dimensionless"/>
<variable initial_value="0.0191924" name="FUM_initial" cmeta:id="FUM_initial" private_interface="out" public_interface="out" units="dimensionless"/>
<variable initial_value="0.00925885" name="MAL_initial" cmeta:id="MAL_initial" private_interface="out" public_interface="out" units="dimensionless"/>
<variable initial_value="0.496682" name="ISOC_initial" cmeta:id="ISOC_initial" private_interface="out" public_interface="out" units="dimensionless"/>
<variable initial_value="0.000137836" name="Cam_initial" cmeta:id="Cam_initial" private_interface="out" public_interface="out" units="dimensionless"/>
<variable initial_value="0.255288" name="CaNSR_initial" cmeta:id="CaNSR_initial" private_interface="out" public_interface="out" units="dimensionless"/>
<variable initial_value="0.255138" name="CaJSR_initial" cmeta:id="CaJSR_initial" private_interface="out" public_interface="out" units="dimensionless"/>
<variable initial_value="8.25461e-05" name="CaSS_initial" cmeta:id="CaSS_initial" private_interface="out" public_interface="out" units="dimensionless"/>
<variable initial_value="5.71121e-05" name="N1_initial" cmeta:id="N1_initial" private_interface="out" public_interface="out" units="dimensionless"/>
<variable initial_value="6.63724e-05" name="P0_initial" cmeta:id="P0_initial" private_interface="out" public_interface="out" units="dimensionless"/>
<variable initial_value="5.73114e-05" name="P1_initial" cmeta:id="P1_initial" private_interface="out" public_interface="out" units="dimensionless"/>
<variable initial_value="0.000106992" name="P2_initial" cmeta:id="P2_initial" private_interface="out" public_interface="out" units="dimensionless"/>
<variable initial_value="9.31884e-05" name="P3_initial" cmeta:id="P3_initial" private_interface="out" public_interface="out" units="dimensionless"/>
<variable initial_value="0.0100663" name="LTRPNCa_initial" cmeta:id="LTRPNCa_initial" private_interface="out" public_interface="out" units="dimensionless"/>
<variable initial_value="0.133453" name="HTRPNCa_initial" cmeta:id="HTRPNCa_initial" private_interface="out" public_interface="out" units="dimensionless"/>
<variable initial_value="1.04295e-05" name="C1_initial" cmeta:id="C1_initial" private_interface="out" public_interface="out" units="dimensionless"/>
<variable initial_value="0.00156783" name="CCa0_initial" cmeta:id="CCa0_initial" private_interface="out" public_interface="out" units="dimensionless"/>
<variable initial_value="0.998424" name="C0_initial" cmeta:id="C0_initial" private_interface="out" public_interface="out" units="dimensionless"/>
<variable initial_value="4.08551e-11" name="C2_initial" cmeta:id="C2_initial" private_interface="out" public_interface="out" units="dimensionless"/>
<variable initial_value="6.55103e-08" name="CCa1_initial" cmeta:id="CCa1_initial" private_interface="out" public_interface="out" units="dimensionless"/>
<variable initial_value="7.11287e-17" name="C3_initial" cmeta:id="C3_initial" private_interface="out" public_interface="out" units="dimensionless"/>
<variable initial_value="1.02648e-12" name="CCa2_initial" cmeta:id="CCa2_initial" private_interface="out" public_interface="out" units="dimensionless"/>
<variable initial_value="4.64382e-23" name="C4_initial" cmeta:id="C4_initial" private_interface="out" public_interface="out" units="dimensionless"/>
<variable initial_value="7.14846e-18" name="CCa3_initial" cmeta:id="CCa3_initial" private_interface="out" public_interface="out" units="dimensionless"/>
<variable initial_value="1.86682e-23" name="CCa4_initial" cmeta:id="CCa4_initial" private_interface="out" public_interface="out" units="dimensionless"/>
<variable initial_value="19.4385" name="CrPi_mito_initial" cmeta:id="CrPi_mito_initial" private_interface="out" public_interface="out" units="dimensionless"/>
<variable initial_value="19.4302" name="CrPi_cyto_initial" cmeta:id="CrPi_cyto_initial" private_interface="out" public_interface="out" units="dimensionless"/>
<variable initial_value="7.97824" name="ATPi_cyto_initial" cmeta:id="ATPi_cyto_initial" private_interface="out" public_interface="out" units="dimensionless"/>
<variable initial_value="0.0502614" name="ASP_initial" cmeta:id="ASP_initial" private_interface="out" public_interface="out" units="dimensionless"/>
<variable initial_value="0.999618" name="N0_initial" cmeta:id="N0_initial" private_interface="out" public_interface="out" units="dimensionless"/>
</component>
</model>
