- Author:
- David Nickerson <nickerso@users.sourceforge.net>
- Date:
- 2012-09-26 15:32:59+12:00
- Desc:
- adding more information to the main documentation page for the workspace, including some useful direct links to various documents.
- Permanent Source URI:
- https://models.fieldml.org/w/andre/VPH-MIP/rawfile/6b9447fa179ec6c4ec0418f82b985750ce7fc2b7/experiments/gNa-150.xml.rdf
<?xml version="1.0"?>
<RDF xmlns="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
<rdf:Description xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:about="gNa-150.xml">
<dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/" rdf:parseType="Resource">
<vCard:N xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" rdf:parseType="Resource">
<vCard:Family>Nickerson</vCard:Family>
<vCard:Given>David</vCard:Given>
</vCard:N>
<vCard:EMAIL xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" rdf:parseType="Resource">
<rdf:value>david.nickerson@nus.edu.sg</rdf:value>
<rdf:type rdf:resource="http://imc.org/vCard/3.0#internet"/>
</vCard:EMAIL>
<vCard:ORG xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" rdf:parseType="Resource">
<vCard:Orgname>National University of Singapore</vCard:Orgname>
<vCard:Orgunit>Division of Bioengineering</vCard:Orgunit>
</vCard:ORG>
</dc:creator>
<dcterms:created xmlns:dcterms="http://purl.org/dc/terms/" rdf:parseType="Resource">
<dcterms:W3CDTF>2008-08-14</dcterms:W3CDTF>
</dcterms:created>
<dc:publisher xmlns:dc="http://purl.org/dc/elements/1.1/">
Division of Bioengineering, National University of Singapore
</dc:publisher>
</rdf:Description>
<rdf:Description xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:about="gNa-150.xml#gNa_150">
<dc:title xmlns:dc="http://purl.org/dc/elements/1.1/">
Hodgkin & Huxley (1952) with periodic stimulus and 150% gNa_max value.
</dc:title>
<cmeta:comment xmlns:cmeta="http://www.cellml.org/metadata/1.0#" rdf:parseType="Resource">
<rdf:value>
Defines suitable boundary and initial conditions to the Hodgkin & Huxley (1952) model in order to produce a train of action potentials arising from an applied periodic electrical stimulus. Uses 150% of the control value of gNa_max.
</rdf:value>
<dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/" rdf:parseType="Resource">
<vCard:FN xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#">David Nickerson</vCard:FN>
</dc:creator>
</cmeta:comment>
<cs:simulation xmlns:cs="http://www.cellml.org/metadata/simulation/1.0#">
<rdf:Description rdf:ID="simulation">
<cs:simulationName>Periodic Stimulus</cs:simulationName>
<cs:multistepMethod>bdf</cs:multistepMethod>
<cs:iterationMethod>functional</cs:iterationMethod>
<cs:boundIntervals rdf:parseType="Collection">
<rdf:Description>
<cs:boundVariable>
<rdf:Description rdf:about="gNa-150.xml#time"/>
</cs:boundVariable>
<cs:maximumStepSize rdf:datatype="http://www.w3.org/2001/XMLSchema#double">
0.01
</cs:maximumStepSize>
<cs:tabulationStepSize rdf:datatype="http://www.w3.org/2001/XMLSchema#double">
0.2
</cs:tabulationStepSize>
<cs:startingValue rdf:datatype="http://www.w3.org/2001/XMLSchema#double">
0
</cs:startingValue>
<cs:endingValue rdf:datatype="http://www.w3.org/2001/XMLSchema#double">
20
</cs:endingValue>
</rdf:Description>
</cs:boundIntervals>
</rdf:Description>
</cs:simulation>
</rdf:Description>
<rdf:Description xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:about="gNa-150.xml#time_component">
<cmeta:comment xmlns:cmeta="http://www.cellml.org/metadata/1.0#" rdf:parseType="Resource">
<rdf:value>
The actual definition of the time variable.
</rdf:value>
</cmeta:comment>
</rdf:Description>
<rdf:Description xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:about="gNa-150.xml#stimulus_protocol_params">
<cmeta:comment xmlns:cmeta="http://www.cellml.org/metadata/1.0#" rdf:parseType="Resource">
<rdf:value>
Here we define the parameters for the applied periodic stimulus.
</rdf:value>
</cmeta:comment>
</rdf:Description>
<rdf:Description xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:about="gNa-150.xml#parameters">
<cmeta:comment xmlns:cmeta="http://www.cellml.org/metadata/1.0#" rdf:parseType="Resource">
<rdf:value>
The model parameters specific to this experiment.
</rdf:value>
</cmeta:comment>
</rdf:Description>
<rdf:Description xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:about="gNa-150.xml#gNa_max">
<dcterms:description xmlns:dcterms="http://purl.org/dc/terms/" rdf:parseType="Resource">
<rdf:value>
The altered value of the maximal conductance of the sodium channel.
</rdf:value>
</dcterms:description>
</rdf:Description>
<rdf:Description xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:about="gNa-150.xml#gNa_max_control">
<dcterms:description xmlns:dcterms="http://purl.org/dc/terms/" rdf:parseType="Resource">
<rdf:value>
The control value of the maximal conductance of the sodium channel.
</rdf:value>
</dcterms:description>
</rdf:Description>
<rdf:Description xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:about="gNa-150.xml#initial_conditions">
<cmeta:comment xmlns:cmeta="http://www.cellml.org/metadata/1.0#" rdf:parseType="Resource">
<rdf:value>
The initial conditions - using all default values in this case.
</rdf:value>
</cmeta:comment>
</rdf:Description>
</RDF>
