Location: VPH-MIP case study on CellML @ 58e44de10bed / index.html
- Author:
- David Nickerson <nickerso@users.sourceforge.net>
- Date:
- 2012-10-05 15:20:03+13:00
- Desc:
- updating documentation to better reflect the VPH-MIP slides and mention how to reproduce the simulation results; adding plot of gating variables added to the SED-ML
- Permanent Source URI:
- https://models.fieldml.org/w/andre/VPH-MIP/rawfile/58e44de10bed7fbc87fd1d437f3001c7b653a738/index.html
This workspace holds an encoding of the Hodgkin & Huxley (1952) model, designed as useful example to use for explaining the basics of using CellML. A more comprehensive encoding of the Hodgkin & Huxley model is also available.
Direct links to some of the useful documents in this workspace:
- The complete Hodgkin & Huxley mathematical model:
components/stimulated.xml; the base model to be instantiated into specific simulation experiments which set the stimulus protocol. - The complete set of default parameter values and initial conditions from the HH paper:
components/default-variable-values.xml - The HH model configured and parameterised with an applied periodic stimulus current:
experiments/periodic-stimulus.xml - A SED-ML description of a simulation experiment for the periodic stimulus experiment:
sed-ml/periodic-stimulus.xml; can be used in the SED-ML Web Tools to produce the results shown in the tutorial.